{"id":83,"date":"2014-04-14T17:42:36","date_gmt":"2014-04-14T09:42:36","guid":{"rendered":"http:\/\/www.pufengdu.org\/srv\/blog\/?p=83"},"modified":"2014-12-02T17:45:09","modified_gmt":"2014-12-02T09:45:09","slug":"%e8%a7%a3%e6%9e%90drugbank%e7%9a%84xml%e6%a0%bc%e5%bc%8f%e6%95%b0%e6%8d%ae%e6%96%87%e4%bb%b6","status":"publish","type":"post","link":"https:\/\/www.pufengdu.org\/blog\/?p=83","title":{"rendered":"\u89e3\u6790DrugBank\u7684XML\u683c\u5f0f\u6570\u636e\u6587\u4ef6"},"content":{"rendered":"<p>DrugBank\u76844.0\u7248\u672c\u76ee\u524d\u53ea\u63d0\u4f9b\u4e86XML\u683c\u5f0f\u7684\u6570\u636e\u4f9b\u4e0b\u8f7d\uff0c\u4ee5\u53ca\u8fd8\u63d0\u4f9b\u4e86\u4e00\u4e2aXSD\u683c\u5f0f\u7684XML Schema\u6587\u4ef6\uff0c\u5982\u4f55\u6709\u6548\u7684\u89e3\u6790\u8fd9\u6837\u683c\u5f0f\u7684\u6570\u636e\uff0c\u5b9e\u9645\u4e0a\u662f\u4e00\u4e2a\u4e0d\u5927\u4e0d\u5c0f\u7684\u95ee\u9898\u3002\u5176\u4e2d\u7684\u4e00\u4e2a\u5173\u952e\u662f\uff0c\u7a76\u7adf\u5982\u4f55\u80fd\u591f\u4eceXML\u683c\u5f0f\u7684\u6570\u636e\u6587\u4ef6\u4e2d\u63d0\u53d6\u6211\u4eec\u611f\u5174\u8da3\u7684\u6570\u636e\u3002<\/p>\n<p>\u7ecf\u8fc7\u82e5\u5e72\u7684\u5c1d\u8bd5\u4e4b\u540e\uff0c\u4f3c\u4e4e\u53ea\u6709\u7ee7\u7eed\u4f7f\u7528C#\u6765\u7f16\u5199\u7a0b\u5e8f\u80fd\u591f\u6709\u6548\u7684\u89e3\u51b3\u8fd9\u4e00\u95ee\u9898\u3002\u7136\u800c\uff0c\u8fd9\u4e2a\u4e8b\u60c5\u786e\u5b9e\u4e0d\u662f\u8fd9\u6837\u76f4\u63a5\u7684\u3002<\/p>\n<p>\u5c06XSD\u6587\u4ef6\u8f6c\u5316\u6210C#\u80fd\u591f\u4f7f\u7528\u7684\u6570\u636e\u7c7b\u6587\u4ef6\uff0c\u8fd9\u662f\u4e00\u4e2a\u6211\u4eec\u65e9\u5c31\u8ba8\u8bba\u8fc7\u7684\u95ee\u9898\uff1a<\/p>\n<pre>\r\nXSD.EXE \/C drugbank.xsd\r\n<\/pre>\n<p>\u8fd9\u6837\u7684\u786e\u80fd\u591f\u5f97\u5230\u4e00\u4e2adrugbank.cs\u6587\u4ef6\uff0c\u4f46\u662f\u5982\u679c\u5c31\u6b64\u628a\u8fd9\u4e2a\u6587\u4ef6\u52a0\u5165\u4e00\u4e2aC#\u7684\u9879\u76ee\u91cc\u9762\uff0c\u7136\u540e\u7528\u4e0b\u9762\u8fd9\u4e2a\u65b9\u6cd5\u8fdb\u884c\u89e3\u6790\uff1a<\/p>\n<pre>\r\nusing System;\r\nusing System.Collections.Generic;\r\nusing System.Linq;\r\nusing System.Text;\r\nusing System.IO;\r\nusing System.Xml;\r\nusing System.Xml.Serialization;\r\n\r\nnamespace db4\r\n{\r\n    public class db4\r\n    {\r\n        public drugs d;\r\n        public db4(string fn)\r\n        {\r\n            XmlSerializer s = new XmlSerializer(typeof(drugs));\r\n            FileStream fs = new FileStream(fn, FileMode.Open);\r\n            XmlReader r = XmlReader.Create(fs);\r\n            d = (drugs)s.Deserialize(r);\r\n            r.Close();\r\n            fs.Close();\r\n            Console.WriteLine(d.drug.Length);\r\n        }\r\n    }\r\n}\r\n<\/pre>\n<p>\u5f88\u62b1\u6b49\uff0c\u8fd9\u6839\u672c\u4e0d\u5de5\u4f5c\u3002\u800c\u4e14\uff0c\u5373\u4fbf\u60f3\u6211\u4eec\u4ee5\u524d\u5904\u7406UniProt\u90a3\u6837\u8fdb\u884c\u4e00\u4e0b\u4fee\u6539\uff0c\u89e3\u51b3XML\u7684\u6570\u7ec4\u7c7b\u578b\u8f6c\u6362\u7684\u95ee\u9898\uff0c\u4e5f\u8fd8\u662f\u4e0d\u5de5\u4f5c\u3002\u771f\u6b63\u89e3\u51b3\u95ee\u9898\u7684\u529e\u6cd5\uff0c\u662f\u8981\u5bf9\u8fd9\u4e2aXML Schema\u8fdb\u884c\u4fee\u6539\u3002<\/p>\n<p>1.\u5c06\u5176\u4e2d420\u884c\u5de6\u53f3\u5f00\u59cb\u7684PropertyType\u7684kind\u7684\u679a\u4e3e\u7c7b\u578b\u9650\u5236\u5168\u90e8\u6ce8\u91ca\u6389\u3002<\/p>\n<p>2.\u8981\u5c06\u5176\u4e2d456\u884c\u5f00\u59cb\u7684source\u7684\u679a\u4e3e\u7c7b\u578b\u5168\u90e8\u6ce8\u91ca\u6389\u3002<\/p>\n<p>\u7136\u540e\u518d\u91cd\u65b0\u8fd0\u884cXSD\u7a0b\u5e8f\uff0c\u8f6c\u5316\u7ecf\u8fc7\u4fee\u6539\u7684drugbank.xsd\u3002\u5728\u91cd\u65b0\u4ea7\u751f\u7684drugbank.cs\u91cc\u9762\uff0c\u57281621\u884c\u7684\u5982\u4e0b\u4ee3\u7801\u4e0a\u4fee\u6539\uff08\u90a3\u4e2aPropertyType\u540e\u9762\u7684\u4e2d\u62ec\u53f7\uff09<\/p>\n<pre>\r\n[System.Xml.Serialization.XmlArrayItemAttribute(\"property\", typeof(PropertyType[]), IsNullable=false)]\r\n<\/pre>\n<p>\u7136\u540e\u91cd\u65b0\u5c06drugbank.cs\u5bfc\u5165C#\u9879\u76ee\uff0c\u5c31\u53ef\u4ee5\u6b63\u786e\u7684\u5bf9drugbank.xml\u8fdb\u884c\u53cd\u5411\u5e8f\u5217\u5316\u4e86\u3002\u81f3\u4e8e\u53cd\u5411\u5e8f\u5217\u5316\u540e\u5f97\u5230\u4e86drugs\u7c7b\u578b\u7684\u5bf9\u8c61\u4e4b\u540e\u5e72\u4ec0\u4e48\uff0c\u90a3\u5c31\u662f\u8981\u6839\u636e\u5177\u4f53\u7684\u7814\u7a76\u5185\u5bb9\u6765\u8fdb\u884c\u4e86\uff0c\u8fd9\u91cc\u5c31\u4e0d\u518d\u591a\u8bf4\u4e86\u3002<\/p>\n<p>\u6700\u540e\u63d0\u9192\u4e24\u70b9\uff1a\u4e00\u662f\uff0c\u8fd9\u7bc7blog\u6240\u9762\u5411\u7684\u662f2014\u5e744\u670814\u65e5\u4e0b\u8f7d\u7684DrugBank\u76844.0\u7248\u672c\u7684\u6570\u636e\u3002\u5982\u679c\u4e0d\u662f\u76f8\u540c\u7684\u6570\u636e\uff0c\u4e0a\u8ff0\u529e\u6cd5\u53ef\u80fd\u4e0d\u884c\u3002\u4e8c\u662f\uff0cXML\u7684\u53cd\u5411\u5e8f\u5217\u5316\u662f\u4e00\u4e2a\u975e\u5e38\u901a\u7528\u7684\u6280\u672f\uff0c\u7136\u800c\u4e3a\u4ec0\u4e48\u4e0d\u80fd\u76f4\u63a5\u628aXML\u6570\u636e\u5bfc\u5165\u6570\u636e\u5e93\uff0c\u4f8b\u5982MySQL\uff0c\u4ecd\u7136\u662f\u4e00\u4e2a\u95ee\u9898\u3002<\/p>\n<p>\u5982\u679c\u6709\u5176\u4ed6\u8ba8\u8bba\uff0c\u6b22\u8fce\u7ed9\u6211\u53d1Email\u3002<\/p>\n","protected":false},"excerpt":{"rendered":"<p>DrugBank\u76844.0\u7248\u672c\u76ee\u524d\u53ea\u63d0\u4f9b\u4e86XML\u683c\u5f0f\u7684\u6570\u636e\u4f9b\u4e0b\u8f7d\uff0c\u4ee5\u53ca\u8fd8\u63d0\u4f9b\u4e86\u4e00\u4e2a &hellip; <a href=\"https:\/\/www.pufengdu.org\/blog\/?p=83\">\u7ee7\u7eed\u9605\u8bfb <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[4],"tags":[],"_links":{"self":[{"href":"https:\/\/www.pufengdu.org\/blog\/index.php?rest_route=\/wp\/v2\/posts\/83"}],"collection":[{"href":"https:\/\/www.pufengdu.org\/blog\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.pufengdu.org\/blog\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.pufengdu.org\/blog\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.pufengdu.org\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=83"}],"version-history":[{"count":3,"href":"https:\/\/www.pufengdu.org\/blog\/index.php?rest_route=\/wp\/v2\/posts\/83\/revisions"}],"predecessor-version":[{"id":169,"href":"https:\/\/www.pufengdu.org\/blog\/index.php?rest_route=\/wp\/v2\/posts\/83\/revisions\/169"}],"wp:attachment":[{"href":"https:\/\/www.pufengdu.org\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=83"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.pufengdu.org\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=83"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.pufengdu.org\/blog\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=83"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}